BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E10SP1|AL426544
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig973 1580 0.0
>3x_Contig973
Length = 4038
Score = 1580 bits (795), Expect = 0.0
Identities = 801/805 (99%)
Strand = Plus / Minus
Query: 1 gatctttggttggctactgcttgadagccttgttgaatttgagtttgtgggaatacaggc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3399 gatctttggttggctactgcttgaaagccttgttgaatttgagtttgtgggaatacaggc 3340
Query: 61 actgtaggcaacagttctaaacctccgaatgtattattacctgtagttgctctgttcgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3339 actgtaggcaacagttctaaacctccgaatgtattattacctgtagttgctctgttcgga 3280
Query: 121 gggactatcagtggggacgattcaggggcggtggaaaatgggttatttgaaacttgagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3279 gggactatcagtggggacgattcaggggcggtggaaaatgggttatttgaaacttgagag 3220
Query: 181 tagttttgcacgctgaatgggtttgtttgttgtctttggagttgttggcgattcacgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3219 tagttttgcacgctgaatgggtttgtttgttgtctttggagttgttggcgattcacgttt 3160
Query: 241 tctagggagaacggattatttggacctgttttggatggaatgattggtgcagtggctgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3159 tctagggagaacggattatttggacctgttttggatggaatgattggtgcagtggctgcg 3100
Query: 301 ttgttcaatggcatcataccggtttgtaagggttgaatcccagtgactgtattttgtaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3099 ttgttcaatggcatcataccggtttgtaagggttgaatcccagtgactgtattttgtaac 3040
Query: 361 ggaggtgccatttgctggggcatttgttgttgcatttgttgttgcatttgttgttgcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3039 ggaggtgccatttgctggggcatttgttgttgcatttgttgttgcatttgttgttgcatt 2980
Query: 421 tgctggggcatctgctgttggccagtttgttgaggagcccgctgttgcatctgttaatct 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2979 tgctggggcatctgctgttggccagtttgttgaggagcccgctgttgcatctgtaaatct 2920
Query: 481 tgcaggaacggattataaccagtttgttgggcaacttgttgtggcatttgctgttgcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2919 tgcaggaacggattataaccagtttgttgggcaacttgttgtggcatttgctgttgcatc 2860
Query: 541 tgttgaggcacttgctgaggtatctgttgtgtcatctgtggttgtacttgctgaggcacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2859 tgttgaggcacttgctgaggtatctgttgtgtcatctgtggttgtacttgctgaggcacc 2800
Query: 601 tgctgaggcatctgttgtgtcatctgtggctgtacctgttgatactgctggaacggattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2799 tgctgaggcatctgttgtgtcatctgtggctgtacctgttgatactgctggaacggattg 2740
Query: 661 cttgtattagccacttgcgctgggcgtgtgtcgaattgaggtgatgccatagacattgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2739 cttgtattagccacttgcgctgggcgtgtgtcgaattgaggtgatgccatagacattgga 2680
Query: 721 ctagtggcaaatggattgtaaccartctgtgtctgttgtatttgctgtaccgattggtgc 780
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2679 ctagtggcaaatggattgtaaccagtctgtgtctgttgtatttgctgtaccgattggtgc 2620
Query: 781 ttcaattggttctccaaagcaawtc 805
|||||||||||||||||||||| ||
Sbjct: 2619 ttcaattggttctccaaagcaattc 2595
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4782
Number of Sequences: 1807
Number of extensions: 4782
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)